2.3.0-dev0
Getting started
Installation
Quick start guide
Frequently asked questions
Examples
API docs
Data structures
Universe
AtomGroup
Groups of atoms
Atom selection language
The topology system
Trajectories
Trajectories
Slicing trajectories
On-the-fly transformations
Units and constants
Input/output
Reading and writing files
Format overview
Guessing
Auxiliary files
Selection exporters
Format reference
Guessers list
Default guesser
Analysis
Analysis
Alignments and RMS fitting
Distances and contacts
Trajectory similarity
Structure
Volumetric analyses
Dimension reduction
Polymers and membranes
Hydrogen Bond Analysis
Writing your own trajectory analysis
Parallelizing analysis
Advanced
Standard residues in MDAnalysis selections
Advanced topology concepts
Example data
Contributing
Contributing to MDAnalysis
Contributing to the main codebase
Contributing to the user guide
Preparing a release
Module imports in MDAnalysis
Tests in MDAnalysis
Development docs
References
MDAnalysis User Guide
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Guessers list
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Guessers list
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